Gene Expression

Editorial: These programs are used to analyze microarray and related data. So far, they cover mostly clustering tools (input a set of experiments to find groups of similar data) and visualization tools to look at the output. Much more to come!
Multi-platform clustering tool from Gavin Sherlock at Stanford. Free only for academic use.
Maple Tree Java program to view expression clusters.

Java TreeView
Download application here (the .dmg file is the Mac version - manual is a separate file).

Cluster 3.0
Derived from Mike Eisen's original Cluster program, this is now cross-platform, including a Mac OS X binary.